Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015846175.1_cds_XP_016509532.1_22456
CDS Infomation

[gene=LOC107826996] [db_xref=GeneID:107826996] [protein=protein FRIGIDA-ESSENTIAL 1-like isoform X2] [protein_id=XP_016509532.1] [location=complement(join(6155..6184,6272..7440,7534..7730,7872..8076,8206..8284))] [gbkey=CDS]
Sequence

ATGCTTGAAGAGGGTAGTGGCAGTTGCAGAATATCTAATTCAGATGAAAGAAGAGAAAAG
AATGATTCAAGCTTGGATGGAAAAAGAACGGTCGTGCTTTCTGATCCTCAAGCTCTTAGA
TACAGTGGGAAAAGGATAACCCATGAAATCCAGCCTTTTGAGCATAAAGTAAGTGCTGAT
ATAGTAAATAGTGATGCTTCTAGCAAGGAAGTTATTGGTGCCCAATTCTCTGAAGGAGGA
GGTCATCAAGAAGCGTCGGAGGATTTACGACCAACGTCATCAAGGTTGGATCTTCCAAAG
ATTAGGCTAAGAAGTTTGTCCCCAGCTGATGATTCTAGTGGTGGAAACAAAAGATCAGCA
GATAGAAGTGAGTTTTACTCTAGAAGTTGGTGCGTCAAAGGAAGGGATCCTCTAACTAGT
GATGATAAGGACGGTGTTTTAGATGCTGCAAAGATGAAAAGCAAACTCATAGATGGAGAA
GGTTCAAAAAATACCACTGAAAGACTAGCAGCAGATTGTATTTCTGATTTGGCAACATCT
GCTGTTCGATGTGGAGAAAATCAAAGGTTGAATAGTGACATTGAATTGCATATGCATAGT
GATGAGCATCGGTCAAACATGCTGTTTAGAGACATCGGAAGGGAGACTCTTGGATGTAAA
TCCTACTTGGCTGGTTATGGAAGCTCTTCATCACTATTACTCAAAAATGATTCTCTTAAT
AAAGATAGCTGTCATAGTGGACTGCTTCTAAGTAGCTCAGTACTGTCATCTTACAAGTAT
CAGAACGCTGAAGTTCTGTCTTATAGCTCAGTTTTGGACGACACGAGTTATAAGAGGACC
CAGCTTATGCTCGGAAATCATCATTATCCACACCTGAATCACTCTGTGGATAGGTGGCCT
TCTTATCTTACTTCTTCTTCAAACCTAGGTCCGGTTGGTGATCAGAAGCTTTTAGACCAT
AGTCGAGAATATTGTTCCTCTAGGTCAATCTCAAACAAGTCTTCAGCACTTCCTGGTTCT
GTAACTGAACCTTTCTCTTGGACTGATTTATCAAGGGACATGGAACACTCACGTGATTAT
AAGACCAAGGTGTATTTTGATGACTGGAAGCCTTCTGTGCCTTTTCAACCATCAACCTTT
CTTAGTCAAATTATTCCCACTCCAGAAAGTCTGTATGATCCGATTCGTGATAGCATTGAG
CAAACCAGCGCAGCAGAGAAAGATTTGACTGCTGATGAAAGAGAAACAGCTGATAGAGCT
ACAGCTCATCAAGAAAACGTGAATACCTCTTCAAAAGAAGAAAAGCACCCAAGATCAGTT
AACCCCAGAGGCCAAAAAAGGACACAATCAAAATTAGAGGGGCCCAGACACAACTATGAA
ATTGATAATGACTTTAGGAGAGATGGATCTGTGAACTATGAATCAGGAGTTTTGAAGCAT
TTTCGTGCTGCTCTTGTGGAATTCGTCAAAGAATTGCTGAAGCCAACTTGGCATGAAGGT
CTCTTGATTAGGGATGCATATAAGATGATTGTTAAGAAATCAGTAGATAAGGTCATTAAC
TCTTTGCAACCTGATCAAATTCCTGATACGACTGAATCCATTAAGCAGTATCTCTCTGTT
TCTAAGCCAAAAGTAGCTAAGCTCATTGAGGGGTATGTGGAGAAATATGGAAAATCTTGA

Peptide Sequence

PEP ID

XP_016509532.1
PEP Infomation

PREDICTED: protein FRIGIDA-ESSENTIAL 1-like isoform X2 [Nicotiana tabacum]
Sequence

MLEEGSGSCRISNSDERREKNDSSLDGKRTVVLSDPQALRYSGKRITHEIQPFEHKVSAD
IVNSDASSKEVIGAQFSEGGGHQEASEDLRPTSSRLDLPKIRLRSLSPADDSSGGNKRSA
DRSEFYSRSWCVKGRDPLTSDDKDGVLDAAKMKSKLIDGEGSKNTTERLAADCISDLATS
AVRCGENQRLNSDIELHMHSDEHRSNMLFRDIGRETLGCKSYLAGYGSSSSLLLKNDSLN
KDSCHSGLLLSSSVLSSYKYQNAEVLSYSSVLDDTSYKRTQLMLGNHHYPHLNHSVDRWP
SYLTSSSNLGPVGDQKLLDHSREYCSSRSISNKSSALPGSVTEPFSWTDLSRDMEHSRDY
KTKVYFDDWKPSVPFQPSTFLSQIIPTPESLYDPIRDSIEQTSAAEKDLTADERETADRA
TAHQENVNTSSKEEKHPRSVNPRGQKRTQSKLEGPRHNYEIDNDFRRDGSVNYESGVLKH
FRAALVEFVKELLKPTWHEGLLIRDAYKMIVKKSVDKVINSLQPDQIPDTTESIKQYLSV
SKPKVAKLIEGYVEKYGKS

Transcript Sequence

Gene sequence data has not been registered.